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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015792592.1_cds_XP_016512934.1_2477
CDS Infomation

[gene=LOC107829977] [db_xref=GeneID:107829977] [protein=short-chain dehydrogenase TIC 32, chloroplastic] [protein_id=XP_016512934.1] [location=join(76887..77016,78377..78608,78840..78919,79255..79408,79535..79613,80226..80313,80391..80437,80614..80796)] [gbkey=CDS]
Sequence

ATGAAGGCTGCTCTCAAATATTTGGTAGGCATTGCTGGCCCAAGTGGCTTTGGCTCTAAA
TCCACTGCTGACCAAGTCACTCAACATTCCTCTCTCAATTCTCAGCAGCTCATGACTGCA
ATTATCACTGGCGCAACATCAGGGATAGGGGCAGAAACAGCAAGAGTACTGGCAAAAAGG
GGTGTAAGGATAGTAATCCCAGCAAGGGACTTAAAGAAAGCAGCAATTGTGAAGGAATCC
ATACAAAAAGAGAGTCCAATGGCTGAGATTATATTATTAGAGATAGACTTGAGTTCAGTT
GCTTCTATTCAGAGATTTTGTGCTCAGTTCTTGTCTTTAGGACTGCCTCTTCACATTCTC
ATAAATAATGCGGGGAAATTTTCGCAGAAACTGGAGTTCTCTGAAGACAAAATCGAGATG
ACTTTTGCCACAAACTACTTAGGTCATTTTCTATTGACAGAGTTGCTATTAGAGAAAATG
GTGGAGACAGCAGAAGCCACAGGGATTCAAGGAAGAATAGTGAATGTTACTTCAGTAGTT
CACAACTGGGTGAAAAGAGATCAATTCCGTTTCTGCAAATTGCTCAATCCCAACAATTAT
AATGGTACTCGTGCATATGCTCAGTCAAAATTGGCCAACATTTTACATGCCAAGGAATTG
TCAAGACAATTAAAGGCAAGAAATGCAAATGTGGCTATCAATGCAGTCCATCCTGGAATT
GTAAAGACTGGAATAATCAGAGATCACAAGGGCTTTATCACAGATTCTCTCTATTTTATG
GCATCAAAGCTTCTAAAGTCAACATCACAGGGTGCAGCAACCACATGCTATGTAGCACTG
AGCCCACAAACAGAAGGGATAAGTGGGAAATACTTTGCAGACTGCAATGAAAGTCACTGT
TCAGTTTTAGCAAATGATGAAACTGAAGCTCTTAAGCTTTGGAAGGGTACTCGTGTTCTC
ATCCATAGAAGATTGTTTCCACATGTAGGTTGA

Peptide Sequence

PEP ID

XP_016512934.1
PEP Infomation

PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Nicotiana tabacum]
Sequence

MKAALKYLVGIAGPSGFGSKSTADQVTQHSSLNSQQLMTAIITGATSGIGAETARVLAKR
GVRIVIPARDLKKAAIVKESIQKESPMAEIILLEIDLSSVASIQRFCAQFLSLGLPLHIL
INNAGKFSQKLEFSEDKIEMTFATNYLGHFLLTELLLEKMVETAEATGIQGRIVNVTSVV
HNWVKRDQFRFCKLLNPNNYNGTRAYAQSKLANILHAKELSRQLKARNANVAINAVHPGI
VKTGIIRDHKGFITDSLYFMASKLLKSTSQGAATTCYVALSPQTEGISGKYFADCNESHC
SVLANDETEALKLWKGTRVLIHRRLFPHVG

Transcript Sequence

Gene sequence data has not been registered.